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1994

Morisato D, Anderson KV. 1994. The spätzle gene encodes a component of the extracellular signaling pathway establishing the dorsal-ventral pattern of the Drosophila embryo.. Cell. 76(4):677-88. Abstract

1996

Alcedo J, Ayzenzon M, Von Ohlen T, Noll M, Hooper JE. 1996. The Drosophila smoothened gene encodes a seven-pass membrane protein, a putative receptor for the hedgehog signal.. Cell. 86(2):221-32. Abstract

1998

Pepinsky RB, Zeng C, Wen D, Rayhorn P, Baker DP, Williams KP, Bixler SA, Ambrose CM, Garber EA, Miatkowski K et al.. 1998. Identification of a palmitic acid-modified form of human Sonic hedgehog.. The Journal of biological chemistry. 273(22):14037-45. Abstract

Vincent S, Wilson R, Coelho C, Affolter M, Leptin M. 1998. The Drosophila protein Dof is specifically required for FGF signaling.. Molecular cell. 2(4):515-25. Abstract

1999

MENDOZA L, Thieffry D, Alvarez-Buylla ER. 1999. Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. Bioinformatics. 15(7):593-606.

Waterman H, Levkowitz G, Alroy I, Yarden Y. 1999. The RING finger of c-Cbl mediates desensitization of the epidermal growth factor receptor.. The Journal of biological chemistry. 274(32):22151-4. Abstract

Levkowitz G, Waterman H, Ettenberg SA, Katz M, Tsygankov AY, Alroy I, Lavi S, Iwai K, Reiss Y, Ciechanover A et al.. 1999. Ubiquitin ligase activity and tyrosine phosphorylation underlie suppression of growth factor signaling by c-Cbl/Sli-1.. Molecular cell. 4(6):1029-40. Abstract

2000

Anderson KV. 2000. Toll signaling pathways in the innate immune response.. Current opinion in immunology. 12(1):13-9. Abstract

Wang G, Amanai K, Wang B, Jiang J. 2000. Interactions with Costal2 and suppressor of fused regulate nuclear translocation and activity of cubitus interruptus.. Genes & development. 14(22):2893-905. Abstract

2001

Amanai K, Jiang J. 2001. Distinct roles of Central missing and Dispatched in sending the Hedgehog signal.. Development (Cambridge, England). 128(24):5119-27. Abstract

2002

Eldar A, Dorfman R, Weiss D, Ashe H, Shilo B-Z, Barkai N. 2002. Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.. Nature. 419(6904):304-8. Abstract

2003

Takeda K, Kaisho T, Akira S. 2003. Toll-like receptors.. Annual review of immunology. 21:335-76. Abstract

2007

Saez-Rodriguez J, Simeoni L, Lindquist JA, Hemenway R, Bommhardt U, Arndt B, Haus U-U, Weismantel R, Gilles ED, Klamt S et al.. 2007. A logical model provides insights into T cell receptor signaling.. PLoS computational biology. 3(8):e163. Abstract

2008

Aikin RA, Ayers KL, Thérond PP. 2008. The role of kinases in the Hedgehog signalling pathway.. EMBO reports. 9(4):330-6. Abstract

Zhang R, Shah MV, Yang J, Nyland SB, Liu X, Yun JK, Albert R, Loughran TP. 2008. Network model of survival signaling in large granular lymphocyte leukemia.. Proceedings of the National Academy of Sciences of the United States of America. 105(42):16308-13. Abstract

2009

Sahin O, Fröhlich H, Löbke C, Korf U, Burmester S, Majety M, Mattern J, Schupp I, Chaouiya C, Thieffry D et al.. 2009. Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance. BMC systems biology. 3:1. Abstract

Abou-Jaoudé W, Ouattara DA, Kaufman M. 2009. From structure to dynamics: frequency tuning in the p53-Mdm2 network I. Logical approach.. Journal of theoretical biology. 258(4):561-77. Abstract

Ayers KL, Rodriguez R, Gallet A, Ruel L, Thérond P. 2009. Tow (Target of Wingless), a novel repressor of the Hedgehog pathway in Drosophila.. Developmental biology. 329(2):280-93. Abstract

Ayers KL, Rodriguez R, Gallet A, Ruel L, Thérond P. 2009. Tow (Target of Wingless), a novel repressor of the Hedgehog pathway in Drosophila.. Developmental biology. 329(2):280-93. Abstract

2010

Ayers KL, Thérond PP. 2010. Evaluating Smoothened as a G-protein-coupled receptor for Hedgehog signalling.. Trends in cell biology. 20(5):287-98. Abstract

2015

Abou-Jaoudé W, Monteiro PT, Naldi A, Grandclaudon M, Soumelis V, Chaouiya C, Thieffry D. 2015. Model checking to assess T-helper cell plasticity. Frontiers in Bioengineering and Biotechnology. 2(86) Abstract

2017

Collombet S, van Oevelen C, Sardina Ortega JL, Abou-Jaoudé W, Di Stefano B, Thomas-Chollier M, Graf T, Thieffry D. 2017. Logical modeling of lymphoid and myeloid cell specification and transdifferentiation.. Proceedings of the National Academy of Sciences of the United States of America. 114(23):5792-5799. Abstract

2018

Zanudo JGT, Steinway SN, Albert R. 2018. Discrete dynamic network modeling of oncogenic signaling: Mechanistic insights for personalized treatment of cancer. Current Opinion in Systems Biology. 9:1-10.

2019