Biblio
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1995. Dynamical behaviour of biological regulatory networks--II. Immunity control in bacteriophage lambda.. Bulletin of mathematical biology. 57(2):277-97. Abstract
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1998. Identification of a palmitic acid-modified form of human Sonic hedgehog.. The Journal of biological chemistry. 273(22):14037-45. Abstract
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1999. Genetic control of flower morphogenesis in Arabidopsis thaliana: a logical analysis. Bioinformatics. 15(7):593-606.
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1999. Ubiquitin ligase activity and tyrosine phosphorylation underlie suppression of growth factor signaling by c-Cbl/Sli-1.. Molecular cell. 4(6):1029-40. Abstract
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2001. The role of Wingless signaling in establishing the anteroposterior and dorsoventral axes of the eye disc.. Development (Cambridge, England). 128(9):1519-29. Abstract
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2001. A Logical Analysis of the Drosophila Gap-gene System. Journal of Theoretical Biology. 211(2):115-141.
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2002. Rasp, a putative transmembrane acyltransferase, is required for Hedgehog signaling.. Development (Cambridge, England). 129(4):843-51. Abstract
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2003. Qualitative Analysis of Regulatory Graphs: A Computational Tool Based on a Discrete Formal Framework. Positive Systems. 294:830-832.
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2003. Segmenting the fly embryo: a logical analysis of the pair-rule cross-regulatory module. Journal of Theoretical Biology. 224(4):517-537.
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2003. Toll-like receptors.. Annual review of immunology. 21:335-76. Abstract
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2003. Binding of the Drosophila cytokine Spätzle to Toll is direct and establishes signaling.. Nature immunology. 4(8):794-800. Abstract
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2003. Mathematical model of the morphogenesis checkpoint in budding yeast.. The Journal of cell biology. 163(6):1243-54. Abstract
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2004. Qualitative Modelling of Genetic Networks: From Logical Regulatory Graphs to Standard Petri Nets. 25th International Conference on Application and Theory of Petri Nets. 3099:137-156.
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2004. A model for restriction point control of the mammalian cell cycle. Journal of Theoretical Biology. 230(4):563-579.
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2004. Integrative analysis of cell cycle control in budding yeast.. Molecular biology of the cell. 15(8):3841-62. Abstract
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2004. Regulated assembly of the Toll signaling complex drives Drosophila dorsoventral patterning.. The EMBO journal. 23(1):100-10. Abstract
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2004. Notch signaling patterns Drosophila mesodermal segments by regulating the bHLH transcription factor twist.. Development (Cambridge, England). 131(10):2359-72. Abstract
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2005. Regulators of the Toll and Imd pathways in the Drosophila innate immune response.. Trends in immunology. 26(4):193-8. Abstract
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2005. Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.coli.. Bioinformatics (Oxford, England). 21 Suppl 2:ii190-6. Abstract
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2006. Dynamical Analysis of the Regulatory Network Defining the Dorsal-Ventral Boundary of the Drosophila Wing Imaginal Disc. Genetics. 174(3):1625-1634.
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2006. Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.. Bioinformatics (Oxford, England). 22(14):e124-31. Abstract
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2006. GINsim: a software suite for the qualitative modelling, simulation and analysis of regulatory networks.. Bio Systems. 84(2):91-100. Abstract
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2007. Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks. Computational Methods in Systems Biology. 4695:233-247.
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2008. Petri net modelling of biological regulatory networks. Journal of Discrete Algorithms. 6(2):165-177.