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Saez-Rodriguez J, Simeoni L, Lindquist JA, Hemenway R, Bommhardt U, Arndt B, Haus U-U, Weismantel R, Gilles ED, Klamt S et al..  2007.  A logical model provides insights into T cell receptor signaling.. PLoS computational biology. 3(8):e163. Abstract
Sahin O, Fröhlich H, Löbke C, Korf U, Burmester S, Majety M, Mattern J, Schupp I, Chaouiya C, Thieffry D et al..  2009.  Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance. BMC systems biology. 3:1. Abstract
Sánchez L, Thieffry D.  2003.  Segmenting the fly embryo: a logical analysis of the pair-rule cross-regulatory module. Journal of Theoretical Biology. 224(4):517-537.
Sánchez L, Thieffry D.  2001.  A Logical Analysis of the Drosophila Gap-gene System. Journal of Theoretical Biology. 211(2):115-141.
Sánchez L, Chaouiya C, Thieffry D.  2008.  Segmenting the fly embryo: logical analysis of the role of the segment polarity cross-regulatory module.. The International journal of developmental biology. 52(8):1059-75. Abstract
Sánchez L, Chaouiya C.  2018.  Logical modelling uncovers developmental constraints in primary sex determination of chicken gonads. J. R. Soc. Interface. . 15
Sánchez L, Chaouiya C.  2016.  Primary sex determination of placental mammals: a modelling study uncovers dynamical developmental constraints in the formation of Sertoli and granulosa cells.. BMC systems biology. 10(1):37. Abstract
Sánchez-Osorio I, Hernández-Martínez1 CA, Martínez-Antonio A.  Submitted.  Exploring Asymmetric Cell Division in Caulobacter Crescentus Using Logic Modeling.
Sánchez-Osorio I, Hernández-Martínez CA, Martínez-Antonio A.  2017.  Modeling Asymmetric Cell Division in Caulobacter crescentus Using a Boolean Logic Approach.. Results and problems in cell differentiation. 61:1-21. Abstract
Sanchez-Villanueva JA, Rodriguez-Jorge O, Ramirez-Pliego O, Rosas-Salgado G, Abou-Jaoudé W, Hernandez C, Naldi A, Thieffry D, Santana MA.  2019.  Contribution of ROS and metabolic status to neonatal and adult CD8+ T cell activation. PLoS One.
Sánchez-Villanueva J, N’Guyen L, Poplineau M, Duprez E, Remy É, Thieffry D.  2024.  Dynamical modelling of the regulatory network underlying Retinoic Acid resistance in Acute Promyelocytic Leukaemia. European Conference in Computational Biology.
Selvaggio G, Canato S, Pawar A, Monteiro PT, Janody F, Chaouiya C.  2020.  Hybrid epithelial-mesenchymal phenotypes are controlled by microenvironmental factors. Cancer Research.
Simão E, REMY E, Thieffry D, Chaouiya C.  2005.  Qualitative modelling of regulated metabolic pathways: application to the tryptophan biosynthesis in E.coli.. Bioinformatics (Oxford, England). 21 Suppl 2:ii190-6. Abstract
Sims D, Duchek P, Baum B.  2009.  PDGF/VEGF signaling controls cell size in Drosophila.. Genome biology. 10(2):R20. Abstract
Sun H, Towb P, Chiem DN, Foster BA, Wasserman SA.  2004.  Regulated assembly of the Toll signaling complex drives Drosophila dorsoventral patterning.. The EMBO journal. 23(1):100-10. Abstract
Sutherland D, Samakovlis C, Krasnow MA.  1996.  branchless encodes a Drosophila FGF homolog that controls tracheal cell migration and the pattern of branching.. Cell. 87(6):1091-101. Abstract
Swarup S, Verheyen EM.  2012.  Wnt/Wingless signaling in Drosophila.. Cold Spring Harbor perspectives in biology. 4(6) Abstract


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